STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yaeFPutative lipoprotein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; lipoprotein. (274 aa)    
Predicted Functional Partners:
yiiX
Putative peptidoglycan peptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
   
 0.834
nlpC
Putative peptidase lipoprotein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; lipoprotein.
      
 0.794
ydhT
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.735
yggD
Putative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
     0.724
ycfT
Conserved hypothetical protein; Homologs of previously reported genes of unknown function; putative membrane component.
  
     0.695
yfbM
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.695
yobB
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.669
ydhW
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.667
ynbD
Putative membrane associated phosphatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.648
inaA
Conserved hypothetical protein; Homologs of previously reported genes of unknown function; 1537798, 6087316.
  
     0.643
Your Current Organism:
Escherichia coli UMN026
NCBI taxonomy Id: 585056
Other names: E. coli UMN026
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.