STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ydhSConserved hypothetical protein; Homologs of previously reported genes of unknown function. (534 aa)    
Predicted Functional Partners:
ynjC
Fused putative transporter subunits of ABC superfamily: membrane components; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
     0.714
fimI
Fimbrial protein involved in type 1 pilus biosynthesis; Function experimentally demonstrated in the studied species; structure.
  
     0.687
ydhT
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.658
CAR13488.1
Putative MobB mobilization protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.
  
     0.656
ygjK
Putative glycosyl hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.647
yahE
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.641
ydcK
Putative enzyme; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
    0.633
yfcH
Conserved hypothetical protein; Homologs of previously reported genes of unknown function; putative enzyme.
      
 0.629
yggD
Putative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
  
     0.626
yegV
Putative kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the carbohydrate kinase PfkB family.
      
 0.625
Your Current Organism:
Escherichia coli UMN026
NCBI taxonomy Id: 585056
Other names: E. coli UMN026
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.