Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
argO | yggE | ECUMN_3267 | ECUMN_3266 | Arginine transporter; Involved in the export of arginine. Important to control the intracellular level of arginine and the correct balance between arginine and lysine; Belongs to the LysE/ArgO transporter (TC 2.A.75) family. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.592 |
gltB | yggE | ECUMN_3692 | ECUMN_3266 | Glutamate synthase, large subunit; Function experimentally demonstrated in the studied species; enzyme. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.495 |
ygfI | yggE | ECUMN_3265 | ECUMN_3266 | Putative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Belongs to the LysR transcriptional regulatory family. | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | 0.517 |
yggE | argO | ECUMN_3266 | ECUMN_3267 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Arginine transporter; Involved in the export of arginine. Important to control the intracellular level of arginine and the correct balance between arginine and lysine; Belongs to the LysE/ArgO transporter (TC 2.A.75) family. | 0.592 |
yggE | gltB | ECUMN_3266 | ECUMN_3692 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Glutamate synthase, large subunit; Function experimentally demonstrated in the studied species; enzyme. | 0.495 |
yggE | ygfI | ECUMN_3266 | ECUMN_3265 | Conserved hypothetical protein; Homologs of previously reported genes of unknown function. | Putative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Belongs to the LysR transcriptional regulatory family. | 0.517 |