STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAR14624.1Putative membrane protein, conserved protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component. (449 aa)    
Predicted Functional Partners:
yghR
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
    0.923
yghS
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
    0.905
ECUMN_3464
Fragment of conserved hypothetical protein; Gene remnant.
 
     0.892
wcaJ
Putative UDP-sugar lipid carrier transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
  
 0.879
yghT
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
    0.859
CAR14622.1
Putative transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.
 
     0.807
ugd
UDP-glucose 6-dehydrogenase; Function experimentally demonstrated in the studied species; enzyme.
  
  
 0.805
rffG
dTDP-glucose 4,6-dehydratase; Function experimentally demonstrated in the studied species; enzyme; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.805
CAR14623.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
       0.800
rffH
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
  
 0.800
Your Current Organism:
Escherichia coli UMN026
NCBI taxonomy Id: 585056
Other names: E. coli UMN026
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.