STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yfeZConserved hypothetical protein; Homologs of previously reported genes of unknown function; putative membrane component. (149 aa)    
Predicted Functional Partners:
ypeA
Putative acyltransferase with acyl-CoA N-acyltransferase domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the acetyltransferase family. YpeA subfamily.
  
    0.903
osmE
DNA-binding transcriptional activator; Function experimentally demonstrated in the studied species; regulator.
  
     0.748
mdoB
Fragment of putative oxidoreductase, Zn-dependent and NAD(P)-binding (partial); Transfers a phosphoglycerol residue from phosphatidylglycerol to the membrane-bound nascent glucan backbones; Belongs to the OpgB family.
  
    0.747
yfeY
Conserved hypothetical protein; Homologs of previously reported genes of unknown function; 7764507.
 
     0.745
ypfG
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.744
mlrA
DNA-binding transcriptional regulator; Function experimentally demonstrated in the studied species; regulator.
  
     0.737
ycfN
Thiamin kinase; Catalyzes the phosphorylation of thiamine to thiamine phosphate.
  
     0.709
ybjX
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.689
spy
Envelope stress induced periplasmic protein; Function experimentally demonstrated in the studied species; cell process.
  
     0.670
yieE
Putative phosphopantetheinyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
     0.669
Your Current Organism:
Escherichia coli IAI39
NCBI taxonomy Id: 585057
Other names: E. coli IAI39
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.