STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fimCChaperone, periplasmic; Function experimentally demonstrated in the studied species; factor. (241 aa)    
Predicted Functional Partners:
fimA
Major type 1 subunit fimbrin (pilin); Function experimentally demonstrated in the studied species; structure.
 
 
 0.999
fimD
Outer membrane usher protein, type 1 fimbrial synthesis; Function experimentally demonstrated in the studied species; factor.
 
 
 0.999
fimF
Minor component of type 1 fimbriae; Function experimentally demonstrated in the studied species; structure.
 
 
 0.999
fimG
Minor component of type 1 fimbriae; Function experimentally demonstrated in the studied species; structure.
  
 
 0.999
fimH
Minor component of type 1 fimbriae; Function experimentally demonstrated in the studied species; structure.
  
 
 0.999
fimI
Fimbrial protein involved in type 1 pilus biosynthesis; Function experimentally demonstrated in the studied species; structure.
 
 
 0.997
sfmH
Putative fimbrial-like adhesin protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.
  
 
 0.987
sfmF
Putative fimbrial-like adhesin protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.
  
 
 0.983
yfaL
Adhesin; Function experimentally demonstrated in the studied species; factor.
   
  
 0.933
lpfC
Putative fimbrial usher; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
  
 
 0.910
Your Current Organism:
Escherichia coli IAI39
NCBI taxonomy Id: 585057
Other names: E. coli IAI39
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.