STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PKH_110570DUF2040 domain-containing protein. (317 aa)    
Predicted Functional Partners:
PKH_061800
Pre-mRNA-splicing factor CEF1, putative.
   
   0.975
PKH_082910
Splicing factor, putative.
     
 0.876
PKH_145700
Pre-mRNA-splicing factor CWC22, putative.
   
 
  0.849
PKH_100350
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
  0.847
PKH_072880
Peptidyl-prolyl cis-trans isomerase, putative.
   
  0.847
PKH_091370
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
  0.818
PKH_123650
Zinc finger protein, putative.
     
 0.807
PKH_142610
RNA-binding protein, putative.
   
 0.787
PKH_081510
CWC16 domain-containing protein, putative.
   
 
  0.753
PKH_122520
Regulator of nonsense transcripts 3B, putative.
   
 
 0.725
Your Current Organism:
Plasmodium knowlesi
NCBI taxonomy Id: 5851
Other names: P. knowlesi strain H, Plasmodium knowlesi (STRAIN H), Plasmodium knowlesi H, Plasmodium knowlesi Malayan H, Plasmodium knowlesi strain H
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.