STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PKH_120520WD repeat-containing protein 16, putative. (720 aa)    
Predicted Functional Partners:
PKH_052390
Ran-specific GTPase-activating protein 1, putative.
    
 0.815
PKH_010140
Uncharacterized protein.
    
 0.734
PKH_050450
SPRY domain, putative.
    
 0.730
PKH_144760
Protein transport protein SEC13, putative; Belongs to the WD repeat SEC13 family.
    
 0.660
PKH_010300
Calcium-dependent protein kinase 3, putative.
    
 0.659
PKH_110480
Ubiquitin/ribosomal fusion protein uba52 homologue, putative.
    
 0.659
PKH_131070
Polyubiquitin, putative.
   
 0.648
PKH_126980
Tubulin epsilon chain, putative; Belongs to the tubulin family.
   
 0.624
PKH_080750
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
   
 0.624
PKH_121110
DNA repair protein RAD5, putative.
    
 0.623
Your Current Organism:
Plasmodium knowlesi
NCBI taxonomy Id: 5851
Other names: P. knowlesi strain H, Plasmodium knowlesi (STRAIN H), Plasmodium knowlesi H, Plasmodium knowlesi Malayan H, Plasmodium knowlesi strain H
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.