STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PKH_143500PPPDE peptidase domain-containing protein, putative. (417 aa)    
Predicted Functional Partners:
PKH_051730
26s proteasome aaa-atpase subunit rpt3,putative; Belongs to the AAA ATPase family.
   
   0.677
PKH_092800
26S protease subunit regulatory subunit 6a,putative; Belongs to the AAA ATPase family.
   
   0.677
PKH_060200
26S proteasome regulatory subunit p55, putative.
   
   0.677
PKH_146620
26S protease regulatory subunit 8, putative; Belongs to the AAA ATPase family.
   
   0.675
PKH_011040
26S proteasome non-ATPase regulatory subunit 4,putative.
    
   0.671
PKH_080720
26S proteasome regulatory subunit 4, putative; Belongs to the AAA ATPase family.
    
   0.670
PKH_011080
Proteasome endopeptidase complex; Belongs to the peptidase T1A family.
    
   0.670
PKH_126890
Proteasome endopeptidase complex; Belongs to the peptidase T1A family.
    
   0.670
PKH_021180
Proteasome subunit alpha type.
    
   0.670
PKH_101440
Proteasome subunit beta; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family.
    
   0.670
Your Current Organism:
Plasmodium knowlesi
NCBI taxonomy Id: 5851
Other names: P. knowlesi strain H, Plasmodium knowlesi (STRAIN H), Plasmodium knowlesi H, Plasmodium knowlesi Malayan H, Plasmodium knowlesi strain H
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.