STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PKH_092090Translation elongation factor EF-1, putative. (545 aa)    
Predicted Functional Partners:
PKH_040790
Peptide chain release factor subunit 1, putative.
   
 0.999
PKH_123970
40S ribosomal protein S3, putative.
   
 0.887
PKH_110230
ABC transporter E family member 1, putative.
   
 
 0.844
PKH_083300
40S ribosomal protein S23, putative; Belongs to the universal ribosomal protein uS12 family.
   
 0.812
PKH_081740
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
  0.797
PKH_082730
60S ribosomal protein l26, Putative.
    
  0.777
PKH_132430
60S ribosomal protein L21, putative.
   
 0.768
PKH_133880
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
  0.768
PKH_121250
40S ribosomal subunit protein S6, putative.
   
 0.763
PKH_031580
Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs.
   
 
 0.759
Your Current Organism:
Plasmodium knowlesi
NCBI taxonomy Id: 5851
Other names: P. knowlesi strain H, Plasmodium knowlesi (STRAIN H), Plasmodium knowlesi H, Plasmodium knowlesi Malayan H, Plasmodium knowlesi strain H
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.