STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PKH_071120Pseudouridylate synthase, putative. (795 aa)    
Predicted Functional Partners:
PKH_100650
RNA methyltransferase, Putative.
  
 
 0.785
PKH_090790
Ribosomal protein L11, mitochondrial, putative; Belongs to the universal ribosomal protein uL11 family.
  
 
 0.758
PKH_131270
GTP-binding protein, putative.
   
 
 0.755
PKH_040570
Ribosomal protein L13, mitochondrial, putative; Belongs to the universal ribosomal protein uL13 family.
  
   0.751
PKH_080950
Ribosomal protein L43, mitochondrial, putative.
   
   0.741
PKH_144050
50S ribosomal protein L24, putative.
   
   0.736
PKH_101580
60S ribosomal protein L12, putative; Belongs to the universal ribosomal protein uL11 family.
   
 
 0.699
PKH_050340
Ribosomal protein L21, apicoplast, putative.
  
   0.689
PKH_132700
Ribosomal protein, putative.
  
   0.689
PKH_080270
60S ribosomal protein L13, putative; Belongs to the universal ribosomal protein uL13 family.
  
   0.688
Your Current Organism:
Plasmodium knowlesi
NCBI taxonomy Id: 5851
Other names: P. knowlesi strain H, Plasmodium knowlesi (STRAIN H), Plasmodium knowlesi H, Plasmodium knowlesi Malayan H, Plasmodium knowlesi strain H
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.