STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PKH_113890Pre-mRNA-splicing factor SLU7, putative. (440 aa)    
Predicted Functional Partners:
PKH_145700
Pre-mRNA-splicing factor CWC22, putative.
   
 0.967
PKH_143670
Pre-mRNA-processing factor 17, putative.
   
 0.964
PKH_071990
Pre-mrna splicing factor protein, putative.
  
 0.958
PKH_110640
Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16, putative.
   
 0.957
PKH_145030
Uncharacterized protein.
   
 0.918
PKH_031100
CGI-201 protein, short form, putative.
   
 
 0.909
PKH_061800
Pre-mRNA-splicing factor CEF1, putative.
   
 
 0.908
PKH_134090
RRM domain-containing protein.
   
 0.902
PKH_140820
U4/U6 small nuclear ribonucleoprotein PRP3, putative.
   
 
 0.889
PKH_030920
Pre-mRNA-processing-splicing factor 8, putative.
    
 
 0.889
Your Current Organism:
Plasmodium knowlesi
NCBI taxonomy Id: 5851
Other names: P. knowlesi strain H, Plasmodium knowlesi (STRAIN H), Plasmodium knowlesi H, Plasmodium knowlesi Malayan H, Plasmodium knowlesi strain H
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.