STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PKH_142300Cation diffusion facilitator family protein, putative. (576 aa)    
Predicted Functional Partners:
PKH_101510
Eukaryotic translation initiation factor 3 subunit B; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome; Belongs to the eIF-3 subunit B family.
      
 0.590
PKH_010510
DNA mismatch repair protein MSH2, putative.
   
  
 0.549
PKH_132290
DNA mismatch repair protein, Msh2p homologue,putative.
   
  
 0.549
PKH_070210
E1-e2_atpase/hydrolase, putative.
  
  
 0.526
PKH_091520
Dna mismatch repair protein mlh1, putative.
      
 0.520
PKH_146130
General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
      
 0.520
PKH_091710
Uncharacterized protein.
   
 
  0.475
PKH_112480
Uncharacterized protein.
   
 
  0.475
PKH_110860
14-3-3 protein, putative; Belongs to the 14-3-3 family.
    
 0.462
PKH_132620
14-3-3 protein, putative.
    
 0.462
Your Current Organism:
Plasmodium knowlesi
NCBI taxonomy Id: 5851
Other names: P. knowlesi strain H, Plasmodium knowlesi (STRAIN H), Plasmodium knowlesi H, Plasmodium knowlesi Malayan H, Plasmodium knowlesi strain H
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.