STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PKH_093040Pre-mRNA-splicing factor 38A, putative. (401 aa)    
Predicted Functional Partners:
PKH_122890
Microfibril-associated protein homologue,putative.
   
 0.998
PKH_146020
Zinc finger protein, putative.
   
 0.993
PKH_145650
Ubiquitin-like modifier HUB1, putative.
    
 0.962
PKH_090850
WW domain-containing protein.
   
 0.946
PKH_100110
Diaphanous homolog, putative.
   
 0.946
PKH_083780
Pre-mRNA-splicing factor PRP46, putative.
 
 
  0.930
PKH_140570
RED-like protein, putative.
   
 0.919
PKH_141010
Alternative splicing regulator, putative.
   
 0.911
PKH_090750
Pre-mRNA-processing factor 6, putative.
   
 0.905
PKH_082910
Splicing factor, putative.
   
 0.904
Your Current Organism:
Plasmodium knowlesi
NCBI taxonomy Id: 5851
Other names: P. knowlesi strain H, Plasmodium knowlesi (STRAIN H), Plasmodium knowlesi H, Plasmodium knowlesi Malayan H, Plasmodium knowlesi strain H
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.