STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PKH_021040Vta1 domain-containing protein. (268 aa)    
Predicted Functional Partners:
PKH_124860
Vacuolar protein sorting-associated protein 4, putative; Belongs to the AAA ATPase family.
   
 0.999
PKH_126450
Vacuolar protein sorting-associated protein 60, putative.
   
 0.999
PKH_070340
Vacuolar protein sorting-associated protein 46, putative.
    
 0.999
GTP-CH
GTP cyclohydrolase 1, putative.
   
   0.976
PKH_113460
Pre-mRNA-splicing factor CWF7, putative.
   
   0.974
PKH_146060
P. knowlesi homologue of yeast snf7, putative.
    
 0.931
PKH_051630
Vacuolar protein sorting-associated protein 2, putative.
    
 0.921
PKH_091390
Transmembrane protein, putative.
    
   0.739
PKH_050230
Integral membrane protein, conserved.
    
   0.739
PKH_031290
Uncharacterized protein.
      
 0.596
Your Current Organism:
Plasmodium knowlesi
NCBI taxonomy Id: 5851
Other names: P. knowlesi strain H, Plasmodium knowlesi (STRAIN H), Plasmodium knowlesi H, Plasmodium knowlesi Malayan H, Plasmodium knowlesi strain H
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.