STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PKH_061570OTU-like cysteine protease, putative. (909 aa)    
Predicted Functional Partners:
PKH_134450
Ribosomal protein S27a, putative.
    
 0.774
PKH_110480
Ubiquitin/ribosomal fusion protein uba52 homologue, putative.
    
  0.731
PKH_131070
Polyubiquitin, putative.
    
 0.720
PKH_141210
Ubiquitin-like protein nedd8 homologue, putative.
    
 0.547
PKH_092980
Ubiquitin-like protein, putative.
    
 0.516
PKH_091060
Ubiquitin domain-containing protein DSK2, putative.
    
 0.516
PKH_071930
Ubiquitin-like protein, putative.
    
 0.516
PKH_081120
DNA repair protein rad23, Putative.
    
 0.508
PKH_050290
RHOMBOID-like protein.
   
  
 0.423
Your Current Organism:
Plasmodium knowlesi
NCBI taxonomy Id: 5851
Other names: P. knowlesi strain H, Plasmodium knowlesi (STRAIN H), Plasmodium knowlesi H, Plasmodium knowlesi Malayan H, Plasmodium knowlesi strain H
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.