STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PKH_120370Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (96 aa)    
Predicted Functional Partners:
PKH_040160
Small nuclear ribonucleoprotein Sm D2.
   
 0.999
PKH_133240
Small nuclear ribonucleoprotein-associated protein B, putative.
   
 0.999
PKH_092460
Small Nuclear ribonucleoprotein F, Putative.
   
 0.999
PKH_070720
Small nuclear ribonucleoprotein Sm D3.
   
 0.999
PKH_092310
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
   
 0.999
PKH_050870
Small nuclear ribonucleoprotein G.
   
 0.999
PKH_080250
U5 small nuclear ribonucleoprotein component, putative.
   
 0.998
PKH_090750
Pre-mRNA-processing factor 6, putative.
   
 0.997
PKH_101210
U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
   
 0.997
PKH_110340
U1 small nuclear ribonucleoprotein 70 kDa homolog, putative.
   
 0.997
Your Current Organism:
Plasmodium knowlesi
NCBI taxonomy Id: 5851
Other names: P. knowlesi strain H, Plasmodium knowlesi (STRAIN H), Plasmodium knowlesi H, Plasmodium knowlesi Malayan H, Plasmodium knowlesi strain H
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.