Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEN95162.1COG1285 Uncharacterized membrane protein. (225 aa)    
Predicted Functional Partners:
AEN95163.1
COG5036 SPX domain-containing protein involved in vacuolar polyphosphate accumulation.
 
    0.990
AEN95161.1
Hypothetical protein.
 
     0.893
AEN95160.1
Hypothetical protein.
 
     0.870
AEN95390.1
Hypothetical protein.
  
  
 0.682
AEN96979.1
Hypothetical protein.
  
  
 0.682
tyrS
tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.
       0.550
AEN97663.1
Cation-transporting ATPase, P-type; COG0474 Cation transport ATPase.
  
 
 0.508
AEN97664.1
Calcium-translocating P-type ATPase, PMCA-type; COG0474 Cation transport ATPase.
  
 
 0.508
AEN98426.1
ATPase, P-type (transporting), HAD superfamily, subfamily IC; COG0474 Cation transport ATPase.
  
 
 0.508
AEN96522.1
Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.
    
   0.480
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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