STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN95169.1COG0395 ABC-type sugar transport system, permease component. (281 aa)    
Predicted Functional Partners:
AEN95168.1
ABC sugar transporter, inner membrane subunit; COG1175 ABC-type sugar transport systems, permease components.
 
 0.997
AEN95167.1
ABC-type maltodextrin transport system, maltodextrin-binding periplasmic component; COG2182 Maltose-binding periplasmic proteins/domains.
 
 0.993
AEN97049.1
COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
 0.982
AEN97258.1
Sugar ABC transporter inner membrane protein; COG1175 ABC-type sugar transport systems, permease components.
 
 0.975
AEN95654.1
COG1175 ABC-type sugar transport systems, permease components.
 
 0.960
AEN97304.1
COG1175 ABC-type sugar transport systems, permease components.
 
 0.956
AEN96963.1
COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
 
 0.915
AEN95170.1
Neopullulanase; COG0366 Glycosidases.
 
  
 0.888
AEN95950.1
ABC transporter inner membrane protein; COG1175 ABC-type sugar transport systems, permease components.
 
 
 0.881
AEN96611.1
COG1175 ABC-type sugar transport systems, permease components.
 
 
 0.881
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.