STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN95176.1ABC transporter permease; COG0577 ABC-type antimicrobial peptide transport system, permease component. (791 aa)    
Predicted Functional Partners:
ftsE
Putative ATPase involved in cell division; Part of the ABC transporter FtsEX involved in cellular division.
  
 
 0.967
AEN95177.1
ABC transporter-like protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
 
  
 0.940
AEN95175.1
Two component system histidine kinase; COG0642 Signal transduction histidine kinase.
 
     0.866
AEN95794.1
Acriflavin resistance protein; COG0841 Cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 
 0.850
AEN95238.1
Hypothetical protein; COG4942 Membrane-bound metallopeptidase.
   
 
 0.788
AEN97728.1
NLP/P60 protein; COG3883 Uncharacterized protein conserved in bacteria.
  
 
 0.698
AEN98349.1
Hypothetical protein; COG0577 ABC-type antimicrobial peptide transport system, permease component.
 
  
 0.682
AEN95174.1
Winged helix family two component transcriptional regulator; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
 
     0.676
AEN98182.1
Hypothetical protein.
  
     0.669
AEN97955.1
Hypothetical protein; COG0577 ABC-type antimicrobial peptide transport system, permease component.
  
  
 0.665
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.