STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN95181.1Hypothetical protein; COG0534 Na+-driven multidrug efflux pump. (440 aa)    
Predicted Functional Partners:
AEN95182.1
2-isopropylmalate synthase; COG2207 AraC-type DNA-binding domain-containing proteins.
 
     0.845
AEN95183.1
Hypothetical protein.
       0.768
AEN98291.1
MATE efflux family protein; COG0534 Na+-driven multidrug efflux pump.
  
     0.517
AEN95184.1
COG0561 Predicted hydrolases of the HAD superfamily.
       0.500
AEN95185.1
Hypothetical protein; COG0296 1,4-alpha-glucan branching enzyme.
       0.488
AEN97895.1
Hypothetical protein; COG0534 Na+-driven multidrug efflux pump.
  
     0.487
AEN95180.1
Hypothetical protein.
       0.455
AEN95179.1
COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
       0.444
AEN95178.1
Hypothetical protein.
       0.424
AEN95177.1
ABC transporter-like protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
       0.403
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.