Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEN95196.1APA family basic amino acid/polyamine antiporter; COG0531 Amino acid transporters. (493 aa)    
Predicted Functional Partners:
AEN95197.1
Hypothetical protein; COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold.
 
     0.734
AEN95195.1
COG4302 Ethanolamine ammonia-lyase, small subunit; Belongs to the EutC family.
  
  
 0.672
AEN95194.1
COG4303 Ethanolamine ammonia-lyase, large subunit.
  
  
 0.660
AEN95170.1
Neopullulanase; COG0366 Glycosidases.
   
 0.645
AEN95371.1
Oligo-1,6-glucosidase; COG0366 Glycosidases.
   
 0.645
AEN95652.1
Cyclomaltodextrinase (maltogenic alpha-amylase); COG0366 Glycosidases.
   
 0.645
AEN95829.1
Alpha amylase catalytic region; COG0366 Glycosidases; Belongs to the glycosyl hydrolase 13 family.
   
 0.645
AEN97487.1
Cyclomaltodextrinase; COG0366 Glycosidases.
   
 0.645
AEN97662.1
Alpha-amylase; COG0366 Glycosidases.
   
 0.645
AEN97749.1
Hypothetical protein.
   
 0.645
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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