STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AEN95198.1COG0584 Glycerophosphoryl diester phosphodiesterase. (266 aa)    
Predicted Functional Partners:
AEN95199.1
Lysophospholipase L2 PLDB, hydrolase of alpha/beta superfamily protein; COG2267 Lysophospholipase.
    
 0.979
eutA
Reactivating factor for ethanolamine ammonia lyase; COG4819 Ethanolamine utilization protein, possible chaperonin protecting lyase from inhibition.
    
 0.933
AEN95195.1
COG4302 Ethanolamine ammonia-lyase, small subunit; Belongs to the EutC family.
    
  0.929
AEN95194.1
COG4303 Ethanolamine ammonia-lyase, large subunit.
    
  0.928
AEN96961.1
COG1653 ABC-type sugar transport system, periplasmic component.
 
  
 0.802
AEN95200.1
Hypothetical protein; COG2270 Permeases of the major facilitator superfamily.
       0.788
AEN95201.1
COG2357 Uncharacterized protein conserved in bacteria.
       0.781
AEN95204.1
Phosphate ABC transporter, inner membrane subunit PstA; COG0581 ABC-type phosphate transport system, permease component.
  
  
 0.660
glpK-2
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
 
  
 0.646
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
 
  
 0.644
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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