Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN95200.1Hypothetical protein; COG2270 Permeases of the major facilitator superfamily. (429 aa)    
Predicted Functional Partners:
AEN95198.1
COG0584 Glycerophosphoryl diester phosphodiesterase.
       0.788
AEN95199.1
Lysophospholipase L2 PLDB, hydrolase of alpha/beta superfamily protein; COG2267 Lysophospholipase.
       0.779
AEN95201.1
COG2357 Uncharacterized protein conserved in bacteria.
       0.773
AEN95202.1
Hypothetical protein; COG0226 ABC-type phosphate transport system, periplasmic component.
  
    0.557
AEN95197.1
Hypothetical protein; COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold.
       0.481
AEN97945.1
Hypothetical protein.
 
     0.431
AEN95196.1
APA family basic amino acid/polyamine antiporter; COG0531 Amino acid transporters.
       0.430
pstB
Phosphate transporter ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
  
    0.415
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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