STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN95224.1Hypothetical protein. (473 aa)    
Predicted Functional Partners:
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
       0.773
AEN97533.1
Hypothetical protein; COG4778 ABC-type phosphonate transport system, ATPase component.
  
     0.770
AEN97575.1
Hypothetical protein; COG0489 ATPases involved in chromosome partitioning.
  
     0.769
AEN95270.1
Multimeric flavodoxin domain-containing protein; COG0438 Glycosyltransferase.
  
     0.765
AEN97515.1
Glycosyl transferase family protein.
  
     0.764
AEN95236.1
Hypothetical protein.
  
     0.755
AEN97696.1
COG1112 Superfamily I DNA and RNA helicases and helicase subunits.
  
     0.742
AEN97908.1
Replisome organizer, phage associated protein.
  
     0.737
AEN97464.1
Spore germination protein-like protein YndE.
  
     0.733
AEN96559.1
Hypothetical protein; COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component.
  
     0.715
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.