STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN95229.1COG4585 Signal transduction histidine kinase. (374 aa)    
Predicted Functional Partners:
AEN95230.1
Hypothetical protein; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
 
 
 0.964
AEN95226.1
Hypothetical protein; COG0842 ABC-type multidrug transport system, permease component.
 
  
 0.894
AEN95227.1
ABC-2 type transporter; COG0842 ABC-type multidrug transport system, permease component.
 
  
 0.887
AEN95228.1
ABC transporter-like protein; COG1131 ABC-type multidrug transport system, ATPase component.
 
   
 0.871
AEN98479.1
Two-component response regulator (extracellular proteinase response regulator); COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
 
 
 0.826
AEN95231.1
Putative deoxyribonuclease; COG0084 Mg-dependent DNase.
       0.486
AEN97109.1
COG0515 Serine/threonine protein kinase.
  
  
 0.422
AEN95516.1
Hypothetical protein.
  
 
 0.413
AEN97167.1
Hypothetical protein.
  
 
 0.413
AEN97215.1
Hypothetical protein.
  
 
 0.413
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.