STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN95244.1Hypothetical protein; COG0842 ABC-type multidrug transport system, permease component. (254 aa)    
Predicted Functional Partners:
AEN97549.1
Teichoic acids export ATP-binding protein TagH; COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component.
  
 
 0.893
AEN97579.1
COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component.
  
 
 0.893
AEN95243.1
Transmembrane ATP-binding protein ABC transporter; COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components.
       0.773
AEN97482.1
COG0562 UDP-galactopyranose mutase.
 
  
 0.581
AEN95242.1
MATE efflux family protein; COG0534 Na+-driven multidrug efflux pump.
       0.545
AEN97498.1
COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
  
 0.485
AEN97496.1
COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
  
 0.451
AEN95246.1
Hypothetical protein; COG0642 Signal transduction histidine kinase.
  
    0.427
AEN95245.1
COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
       0.425
AEN95275.1
Glycosyl transferase family protein.
  
  
 0.412
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.