STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN95262.1COG2604 Uncharacterized protein conserved in bacteria. (607 aa)    
Predicted Functional Partners:
AEN95284.1
COG2089 Sialic acid synthase.
 
   
 0.797
AEN95261.1
Hypothetical protein.
       0.741
AEN95273.1
COG4641 Uncharacterized protein conserved in bacteria.
 
  
 0.682
AEN95276.1
COG1083 CMP-N-acetylneuraminic acid synthetase.
 
     0.681
AEN95260.1
Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
 
 0.624
AEN95311.1
COG4641 Uncharacterized protein conserved in bacteria.
 
  
 0.615
AEN95285.1
COG3980 Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase.
 
   
 0.603
AEN95270.1
Multimeric flavodoxin domain-containing protein; COG0438 Glycosyltransferase.
 
  
 0.586
AEN95266.1
UDP-4-dehydro-6-deoxy-2-acetamido-D-glucose 4-reductase; COG1086 Predicted nucleoside-diphosphate sugar epimerases.
 
  
 0.570
AEN97446.1
Hypothetical protein; COG0438 Glycosyltransferase.
 
  
 0.538
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.