Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEN95271.1 | AEN95272.1 | RHOM_00720 | RHOM_00725 | COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases. | Hypothetical protein; COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases. | 0.809 |
AEN95271.1 | AEN95273.1 | RHOM_00720 | RHOM_00730 | COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases. | COG4641 Uncharacterized protein conserved in bacteria. | 0.573 |
AEN95271.1 | AEN97685.1 | RHOM_00720 | RHOM_12885 | COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases. | Putative short-chain dehydrogenases/reductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.440 |
AEN95272.1 | AEN95271.1 | RHOM_00725 | RHOM_00720 | Hypothetical protein; COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases. | COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases. | 0.809 |
AEN95272.1 | AEN95273.1 | RHOM_00725 | RHOM_00730 | Hypothetical protein; COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases. | COG4641 Uncharacterized protein conserved in bacteria. | 0.573 |
AEN95272.1 | AEN97685.1 | RHOM_00725 | RHOM_12885 | Hypothetical protein; COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases. | Putative short-chain dehydrogenases/reductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.440 |
AEN95273.1 | AEN95271.1 | RHOM_00730 | RHOM_00720 | COG4641 Uncharacterized protein conserved in bacteria. | COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases. | 0.573 |
AEN95273.1 | AEN95272.1 | RHOM_00730 | RHOM_00725 | COG4641 Uncharacterized protein conserved in bacteria. | Hypothetical protein; COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases. | 0.573 |
AEN97685.1 | AEN95271.1 | RHOM_12885 | RHOM_00720 | Putative short-chain dehydrogenases/reductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family. | COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases. | 0.440 |
AEN97685.1 | AEN95272.1 | RHOM_12885 | RHOM_00725 | Putative short-chain dehydrogenases/reductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Hypothetical protein; COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases. | 0.440 |