Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEN95277.1Lipopolysaccharide cholinephosphotransferase; COG3475 LPS biosynthesis protein. (326 aa)    
Predicted Functional Partners:
AEN97562.1
COG3475 LPS biosynthesis protein.
  
  
 
0.928
AEN95276.1
COG1083 CMP-N-acetylneuraminic acid synthetase.
       0.637
AEN95278.1
Hypothetical protein; COG1131 ABC-type multidrug transport system, ATPase component.
       0.618
AEN95275.1
Glycosyl transferase family protein.
       0.595
AEN95279.1
Hypothetical protein.
       0.584
AEN95293.1
Aminotransferase; COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon).
 
   
 0.513
AEN95274.1
COG4641 Uncharacterized protein conserved in bacteria.
       0.420
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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