STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEN95279.1Hypothetical protein. (217 aa)    
Predicted Functional Partners:
AEN95283.1
COG1216 Predicted glycosyltransferases.
  
 0.815
AEN96517.1
Flagellar motor switch protein; COG1776 Chemotaxis protein CheC, inhibitor of MCP methylation.
    
   0.808
AEN97494.1
Undecaprenyl-phosphate glucose phosphotransferase; COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
  
  
 0.779
AEN95278.1
Hypothetical protein; COG1131 ABC-type multidrug transport system, ATPase component.
       0.693
AEN95288.1
COG1216 Predicted glycosyltransferases.
  
 0.663
AEN97436.1
Hypothetical protein; COG3642 Mn2+-dependent serine/threonine protein kinase.
  
     0.617
AEN95274.1
COG4641 Uncharacterized protein conserved in bacteria.
 
     0.616
AEN95281.1
COG4641 Uncharacterized protein conserved in bacteria.
 
     0.605
AEN95277.1
Lipopolysaccharide cholinephosphotransferase; COG3475 LPS biosynthesis protein.
       0.586
AEN95294.1
Histidinol-phosphate phosphatase family protein; COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon).
  
 
 0.580
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.