Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEN95275.1 | AEN95279.1 | RHOM_00740 | RHOM_00760 | Glycosyl transferase family protein. | Hypothetical protein. | 0.529 |
AEN95275.1 | AEN95281.1 | RHOM_00740 | RHOM_00770 | Glycosyl transferase family protein. | COG4641 Uncharacterized protein conserved in bacteria. | 0.534 |
AEN95275.1 | AEN95283.1 | RHOM_00740 | RHOM_00780 | Glycosyl transferase family protein. | COG1216 Predicted glycosyltransferases. | 0.781 |
AEN95275.1 | AEN95286.1 | RHOM_00740 | RHOM_00795 | Glycosyl transferase family protein. | Hypothetical protein. | 0.406 |
AEN95275.1 | AEN96517.1 | RHOM_00740 | RHOM_07010 | Glycosyl transferase family protein. | Flagellar motor switch protein; COG1776 Chemotaxis protein CheC, inhibitor of MCP methylation. | 0.808 |
AEN95275.1 | AEN97494.1 | RHOM_00740 | RHOM_11930 | Glycosyl transferase family protein. | Undecaprenyl-phosphate glucose phosphotransferase; COG2148 Sugar transferases involved in lipopolysaccharide synthesis. | 0.779 |
AEN95279.1 | AEN95275.1 | RHOM_00760 | RHOM_00740 | Hypothetical protein. | Glycosyl transferase family protein. | 0.529 |
AEN95279.1 | AEN95281.1 | RHOM_00760 | RHOM_00770 | Hypothetical protein. | COG4641 Uncharacterized protein conserved in bacteria. | 0.605 |
AEN95279.1 | AEN95282.1 | RHOM_00760 | RHOM_00775 | Hypothetical protein. | Hypothetical protein; COG0456 Acetyltransferases. | 0.411 |
AEN95279.1 | AEN95283.1 | RHOM_00760 | RHOM_00780 | Hypothetical protein. | COG1216 Predicted glycosyltransferases. | 0.815 |
AEN95279.1 | AEN95284.1 | RHOM_00760 | RHOM_00785 | Hypothetical protein. | COG2089 Sialic acid synthase. | 0.431 |
AEN95279.1 | AEN95285.1 | RHOM_00760 | RHOM_00790 | Hypothetical protein. | COG3980 Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase. | 0.405 |
AEN95279.1 | AEN95286.1 | RHOM_00760 | RHOM_00795 | Hypothetical protein. | Hypothetical protein. | 0.419 |
AEN95279.1 | AEN95287.1 | RHOM_00760 | RHOM_00800 | Hypothetical protein. | Glutamine--scyllo-inositol transaminase; COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family. | 0.436 |
AEN95279.1 | AEN96517.1 | RHOM_00760 | RHOM_07010 | Hypothetical protein. | Flagellar motor switch protein; COG1776 Chemotaxis protein CheC, inhibitor of MCP methylation. | 0.808 |
AEN95279.1 | AEN97494.1 | RHOM_00760 | RHOM_11930 | Hypothetical protein. | Undecaprenyl-phosphate glucose phosphotransferase; COG2148 Sugar transferases involved in lipopolysaccharide synthesis. | 0.779 |
AEN95281.1 | AEN95275.1 | RHOM_00770 | RHOM_00740 | COG4641 Uncharacterized protein conserved in bacteria. | Glycosyl transferase family protein. | 0.534 |
AEN95281.1 | AEN95279.1 | RHOM_00770 | RHOM_00760 | COG4641 Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.605 |
AEN95281.1 | AEN95282.1 | RHOM_00770 | RHOM_00775 | COG4641 Uncharacterized protein conserved in bacteria. | Hypothetical protein; COG0456 Acetyltransferases. | 0.774 |
AEN95281.1 | AEN95283.1 | RHOM_00770 | RHOM_00780 | COG4641 Uncharacterized protein conserved in bacteria. | COG1216 Predicted glycosyltransferases. | 0.816 |
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