STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEN95285.1COG3980 Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase. (344 aa)    
Predicted Functional Partners:
AEN95284.1
COG2089 Sialic acid synthase.
 
 
 0.989
AEN95287.1
Glutamine--scyllo-inositol transaminase; COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.959
AEN95282.1
Hypothetical protein; COG0456 Acetyltransferases.
 
  
 0.922
AEN95276.1
COG1083 CMP-N-acetylneuraminic acid synthetase.
 
   
 0.845
AEN95266.1
UDP-4-dehydro-6-deoxy-2-acetamido-D-glucose 4-reductase; COG1086 Predicted nucleoside-diphosphate sugar epimerases.
 
   
 0.843
AEN95286.1
Hypothetical protein.
       0.788
AEN95283.1
COG1216 Predicted glycosyltransferases.
       0.651
AEN95288.1
COG1216 Predicted glycosyltransferases.
       0.642
AEN95262.1
COG2604 Uncharacterized protein conserved in bacteria.
 
   
 0.628
AEN95267.1
Pseudaminic acid biosynthesis protein PseA; COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control.
 
     0.609
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.