Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEN95292.1Methyltransferase type 11; COG0500 SAM-dependent methyltransferases. (251 aa)    
Predicted Functional Partners:
AEN95293.1
Aminotransferase; COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon).
       0.744
AEN95294.1
Histidinol-phosphate phosphatase family protein; COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon).
  
 
 0.611
AEN95291.1
Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
   
   0.551
AEN95296.1
O-methyltransferase; COG1086 Predicted nucleoside-diphosphate sugar epimerases.
  
  
 0.447
AEN95295.1
GHMP kinase; COG2605 Predicted kinase related to galactokinase and mevalonate kinase.
       0.422
AEN95290.1
Hypothetical protein; COG2230 Cyclopropane fatty acid synthase and related methyltransferases.
  
   0.408
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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