STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEN95297.1Capsular polysaccharide biosynthsis protein; COG0463 Glycosyltransferases involved in cell wall biogenesis. (307 aa)    
Predicted Functional Partners:
AEN95298.1
Radical SAM domain-containing protein; COG0535 Predicted Fe-S oxidoreductases.
       0.774
AEN95299.1
COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
    
0.743
AEN95295.1
GHMP kinase; COG2605 Predicted kinase related to galactokinase and mevalonate kinase.
  
    0.705
AEN95300.1
Methyltransferase type 12; COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
    
0.703
AEN95296.1
O-methyltransferase; COG1086 Predicted nucleoside-diphosphate sugar epimerases.
       0.694
AEN95294.1
Histidinol-phosphate phosphatase family protein; COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon).
  
 
 0.683
AEN97494.1
Undecaprenyl-phosphate glucose phosphotransferase; COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
 
  
 0.601
AEN95305.1
Amino acid adenylation domain protein; COG1020 Non-ribosomal peptide synthetase modules and related proteins; Belongs to the ATP-dependent AMP-binding enzyme family.
   
 
 0.512
AEN95301.1
Glycosyl transferase GT2 family protein; COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes.
  
    0.501
AEN95303.1
Hypothetical protein.
  
    0.501
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.