STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN95307.1COG0463 Glycosyltransferases involved in cell wall biogenesis. (380 aa)    
Predicted Functional Partners:
AEN95308.1
methylated-DNA-(protein)-cysteine S-methyltransferase; COG2315 Uncharacterized protein conserved in bacteria.
 
     0.793
AEN95306.1
COG0279 Phosphoheptose isomerase.
   
 
 0.643
AEN95283.1
COG1216 Predicted glycosyltransferases.
  
 0.573
AEN95286.1
Hypothetical protein.
 
  
 0.543
AEN95279.1
Hypothetical protein.
 
  
 0.525
AEN95275.1
Glycosyl transferase family protein.
 
  
 0.521
AEN97494.1
Undecaprenyl-phosphate glucose phosphotransferase; COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
 
  
 0.510
AEN95309.1
Hypothetical protein.
       0.499
AEN95300.1
Methyltransferase type 12; COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
     0.461
AEN95311.1
COG4641 Uncharacterized protein conserved in bacteria.
 
    0.445
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.