STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
AEN95374.1Hypothetical protein; COG0642 Signal transduction histidine kinase. (423 aa)    
Predicted Functional Partners:
AEN96391.1
Diguanylate cyclase/phosphodiesterase; COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain.
 
0.972
AEN98437.1
COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain.
 
 0.966
AEN95379.1
PAS/PAC sensor hybrid histidine kinase; COG0784 FOG: CheY-like receiver.
 
 
0.955
AEN95559.1
Signaling protein; COG2199 FOG: GGDEF domain.
 
 
 0.944
AEN96787.1
MCP methyltransferase, CheR-type; COG1352 Methylase of chemotaxis methyl-accepting proteins.
 
  
 0.922
AEN96314.1
COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain.
 
 
 0.877
AEN96120.1
COG0642 Signal transduction histidine kinase.
 
 
 
0.844
AEN97013.1
COG1024 Enoyl-CoA hydratase/carnithine racemase.
   
 0.827
AEN97485.1
3-hydroxybutyryl-coA dehydratase; COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 0.827
AEN97363.1
Modulation of CheA activity in response to attractants (chemotaxis protein); COG0835 Chemotaxis signal transduction protein.
 
 
 0.818
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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