Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEN95403.1Magnesium-protoporphyrin IX monomethyl ester oxidative cyclase; COG1032 Fe-S oxidoreductase. (576 aa)    
Predicted Functional Partners:
AEN95402.1
Hypothetical protein; COG2199 FOG: GGDEF domain.
       0.773
AEN95404.1
Hypothetical protein; COG2176 DNA polymerase III, alpha subunit (gram-positive type).
  
    0.737
AEN95401.1
Hypothetical protein; Probably functions as a manganese efflux pump.
       0.490
AEN97437.1
COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases.
 
  
 0.476
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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