Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AEN95428.1COG3943 Virulence protein. (342 aa)    
Predicted Functional Partners:
AEN95429.1
Hypothetical protein.
       0.773
AEN95996.1
Hypothetical protein; COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases.
  
    0.631
AEN97282.1
COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases.
  
    0.631
AEN97278.1
Type I restriction/modification specificity protein; COG0732 Restriction endonuclease S subunits.
 
    0.602
AEN95347.1
COG0286 Type I restriction-modification system methyltransferase subunit.
 
    0.548
AEN97756.1
COG0286 Type I restriction-modification system methyltransferase subunit.
 
    0.517
AEN97130.1
N-6 DNA methylase; COG0286 Type I restriction-modification system methyltransferase subunit.
 
    0.507
AEN95350.1
Restriction modification system DNA specificity domain-containing protein; COG0732 Restriction endonuclease S subunits.
  
    0.506
AEN97277.1
Hypothetical protein; COG0732 Restriction endonuclease S subunits.
  
    0.506
AEN97280.1
Type I restriction-modification system, specificity protein; COG0732 Restriction endonuclease S subunits.
  
    0.506
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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