STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN95455.1Hypothetical protein. (46 aa)    
Predicted Functional Partners:
AEN95454.1
TRAG family protein; COG3505 Type IV secretory pathway, VirD4 components.
 
     0.839
AEN98187.1
Hypothetical protein.
 
     0.769
AEN97184.1
Hypothetical protein.
 
     0.755
AEN97842.1
Hypothetical protein.
 
     0.755
AEN95493.1
Hypothetical protein.
 
     0.747
AEN98226.1
COG3081 Nucleoid-associated protein.
  
     0.742
AEN98225.1
Conjugal transfer protein; COG3505 Type IV secretory pathway, VirD4 components.
 
     0.718
AEN98202.1
Conjugal transfer protein; COG3505 Type IV secretory pathway, VirD4 components.
 
     0.707
AEN95425.1
TRAG family protein; COG3505 Type IV secretory pathway, VirD4 components.
 
     0.684
AEN95495.1
Hypothetical protein; COG3451 Type IV secretory pathway, VirB4 components.
 
     0.677
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.