STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN95463.1Phage protein. (249 aa)    
Predicted Functional Partners:
AEN95464.1
COG1484 DNA replication protein.
 
    0.949
AEN95465.1
Hypothetical protein.
 
     0.948
AEN95466.1
COG1961 Site-specific recombinases, DNA invertase Pin homologs.
 
     0.832
AEN95461.1
Hypothetical protein.
 
     0.778
AEN97190.1
Hypothetical protein; COG3843 Type IV secretory pathway, VirD2 components (relaxase).
 
     0.777
AEN97186.1
Hypothetical protein.
 
     0.775
AEN97191.1
Hypothetical protein.
 
     0.773
AEN95460.1
Hypothetical protein.
 
     0.772
AEN97187.1
COG1484 DNA replication protein.
 
    0.764
AEN97198.1
COG1484 DNA replication protein.
 
    0.730
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.