Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AEN95471.1Hypothetical protein; COG1349 Transcriptional regulators of sugar metabolism. (113 aa)    
Predicted Functional Partners:
AEN95472.1
Hypothetical protein.
 
     0.946
AEN98306.1
PTS system, fructose-specific, IIABC component; COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type).
  
  
 0.853
AEN95470.1
Hypothetical protein; COG1396 Predicted transcriptional regulators.
  
     0.771
AEN98194.1
Hypothetical protein.
  
     0.769
AEN95491.1
Hypothetical protein.
  
     0.763
AEN98189.1
Hypothetical protein.
  
     0.763
AEN95488.1
Putative conjugal transfer protein.
  
     0.748
AEN98197.1
Transcriptional regulator, XRE family protein; COG1396 Predicted transcriptional regulators.
  
     0.727
AEN95489.1
COG0358 DNA primase (bacterial type).
 
     0.665
AEN98196.1
Hypothetical protein.
  
     0.625
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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