Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN95474.1COG0582 Integrase; Belongs to the 'phage' integrase family. (431 aa)    
Predicted Functional Partners:
AEN95475.1
Hypothetical protein; COG1396 Predicted transcriptional regulators.
 
    0.894
AEN97627.1
Hypothetical protein; COG1396 Predicted transcriptional regulators.
  
    0.771
AEN97798.1
Hypothetical protein; COG1396 Predicted transcriptional regulators.
  
    0.771
AEN95479.1
Putative conjugal transfer protein.
 
     0.579
AEN97801.1
Putative conjugal transfer protein.
  
     0.464
AEN97623.1
Putative conjugal transfer protein.
  
     0.427
AEN97803.1
Permease; COG0577 ABC-type antimicrobial peptide transport system, permease component.
  
     0.412
AEN96696.1
COG0287 Prephenate dehydrogenase.
  
    0.406
AEN97593.1
COG1040 Predicted amidophosphoribosyltransferases.
   
    0.401
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.