STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN95483.1COG1122 ABC-type cobalt transport system, ATPase component. (490 aa)    
Predicted Functional Partners:
AEN95482.1
COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters.
 
 
 0.987
AEN95481.1
Hypothetical protein.
 
    0.951
AEN95480.1
AraC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins.
 
     0.881
AEN95485.1
ABC transporter ATP-binding protein; COG1132 ABC-type multidrug transport system, ATPase and permease components.
    
0.842
AEN95484.1
ABC transporter ATP-binding protein; COG1132 ABC-type multidrug transport system, ATPase and permease components.
 
    
0.838
AEN96024.1
COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters.
 
 
 0.836
AEN98069.1
Hypothetical protein; COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 
 0.788
AEN95414.1
COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters.
  
 
 0.772
AEN95721.1
Hypothetical protein; COG4166 ABC-type oligopeptide transport system, periplasmic component.
  
 0.764
AEN98068.1
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 
 0.752
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.