STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN95548.1COG0386 Glutathione peroxidase. (54 aa)    
Predicted Functional Partners:
AEN95550.1
COG0526 Thiol-disulfide isomerase and thioredoxins; Belongs to the thioredoxin family.
  
 0.799
AEN95549.1
COG0492 Thioredoxin reductase.
  
  
 0.774
AEN95547.1
Hypothetical protein.
       0.773
AEN95552.1
COG1846 Transcriptional regulators.
 
  
 0.709
AEN95551.1
Peroxiredoxin; COG0386 Glutathione peroxidase.
 
    
0.590
AEN95545.1
Transporter, AEC family protein; COG0679 Predicted permeases.
 
     0.546
AEN97938.1
COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family.
  
 
 0.528
AEN95555.1
Hypothetical protein.
 
     0.517
AEN95546.1
Hypothetical protein.
       0.482
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
  
 0.426
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.