Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN95605.1COG3862 Uncharacterized protein with conserved CXXC pairs. (121 aa)    
Predicted Functional Partners:
AEN95606.1
Sarcosine oxidase alpha subunit; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases.
    0.965
AEN95607.1
Glycerol-3-phosphate dehydrogenase GlpA; COG0579 Predicted dehydrogenase.
 
    0.941
AEN95384.1
Sarcosine oxidase alpha subunit; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases.
    0.881
AEN95385.1
FAD-dependent oxidoreductase; COG0579 Predicted dehydrogenase.
 
    0.814
AEN95604.1
COG1954 Glycerol-3-phosphate responsive antiterminator (mRNA-binding).
 
    0.728
AEN95381.1
COG1954 Glycerol-3-phosphate responsive antiterminator (mRNA-binding).
 
    0.424
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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