STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AEN95606.1Sarcosine oxidase alpha subunit; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases. (429 aa)    
Predicted Functional Partners:
AEN95607.1
Glycerol-3-phosphate dehydrogenase GlpA; COG0579 Predicted dehydrogenase.
  
 0.972
AEN95605.1
COG3862 Uncharacterized protein with conserved CXXC pairs.
    0.965
AEN95383.1
NAD(FAD)-dependent dehydrogenase; COG3862 Uncharacterized protein with conserved CXXC pairs.
    0.921
AEN95385.1
FAD-dependent oxidoreductase; COG0579 Predicted dehydrogenase.
  
 0.879
AEN96902.1
Thioredoxin; COG0526 Thiol-disulfide isomerase and thioredoxins; Belongs to the thioredoxin family.
  
 
 0.804
AEN95550.1
COG0526 Thiol-disulfide isomerase and thioredoxins; Belongs to the thioredoxin family.
  
 
 0.706
AEN95604.1
COG1954 Glycerol-3-phosphate responsive antiterminator (mRNA-binding).
 
    0.699
AEN97938.1
COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family.
  
 
 0.617
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
  
 
 0.509
AEN98112.1
Hypothetical protein.
  
  
 0.494
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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