STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEN95627.1Adenylate/guanylate cyclase; COG0004 Ammonia permease. (398 aa)    
Predicted Functional Partners:
AEN95626.1
COG0347 Nitrogen regulatory protein PII; Belongs to the P(II) protein family.
 
 0.999
AEN96540.1
Hypothetical protein.
  
 
 0.961
AEN97041.1
COG0067 Glutamate synthase domain 1.
 
  
 0.836
AEN98253.1
COG0642 Signal transduction histidine kinase.
  
 
 0.693
AEN96176.1
COG0174 Glutamine synthetase.
  
  
 0.625
nadE
NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
     
 0.586
AEN95628.1
Hypothetical protein; COG0784 FOG: CheY-like receiver.
  
  
 0.556
AEN98284.1
Putative hydratase; COG1048 Aconitase A.
  
  
 0.545
AEN96177.1
Hypothetical protein; COG3707 Response regulator with putative antiterminator output domain.
  
  
 0.521
AEN98437.1
COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain.
      0.468
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.