Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AEN95646.1COG4260 Putative virion core protein (lumpy skin disease virus). (440 aa)    
Predicted Functional Partners:
AEN95648.1
Hypothetical protein; COG1512 Beta-propeller domains of methanol dehydrogenase type.
 
  
 0.989
AEN95647.1
Hypothetical protein.
 
     0.957
AEN97693.1
Hypothetical protein.
  
  
 0.606
AEN95645.1
Hypothetical protein; COG0060 Isoleucyl-tRNA synthetase.
       0.570
prfB
Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.
  
    0.561
AEN95649.1
COG4492 ACT domain-containing protein; Belongs to the UPF0735 family.
       0.523
AEN95650.1
COG0460 Homoserine dehydrogenase.
       0.450
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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