STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEN95656.1Putative sporulation protein YtaF; Probably functions as a manganese efflux pump. (206 aa)    
Predicted Functional Partners:
coaE
dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
  
    0.657
AEN96316.1
Hypothetical protein.
 
     0.516
AEN95654.1
COG1175 ABC-type sugar transport systems, permease components.
       0.515
AEN95655.1
COG3833 ABC-type maltose transport systems, permease component.
       0.515
AEN95652.1
Cyclomaltodextrinase (maltogenic alpha-amylase); COG0366 Glycosidases.
       0.479
AEN95653.1
Hypothetical protein; COG2182 Maltose-binding periplasmic proteins/domains.
       0.479
AEN97713.1
Hypothetical protein; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes.
  
     0.461
AEN96678.1
Peptidase S14 ClpP; COG0740 Protease subunit of ATP-dependent Clp proteases.
  
   
 0.430
AEN95596.1
COG2208 Serine phosphatase RsbU, regulator of sigma subunit.
  
     0.412
glpK-2
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
       0.412
Your Current Organism:
Roseburia hominis
NCBI taxonomy Id: 585394
Other names: R. hominis A2-183, Roseburia hominis A2-183, Roseburia hominis str. A2-183, Roseburia hominis strain A2-183, butyrate-producing bacterium A2-183
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